project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP059643 SRS1171726 SRX1441824 SRR2939555 7169008 7169008 1 FALSE FALSE 6983335 515666656 NA NA 2015-11-20T15:45:16.000 2016-01-05T01:47:04.123 2016-01-05T01:52:22.127 74 GSM1948558 SRR2939555.bw rep2_siMYC c("sirna: siMYC", "replicates: 2") SRP059643 SRS1171727 SRX1441823 SRR2939554 7025539 7025539 1 FALSE FALSE 6821963 504015217 NA NA 2015-11-20T15:45:15.000 2016-01-05T01:47:03.193 2016-01-05T01:52:21.950 74 GSM1948557 SRR2939554.bw rep2_siCtrl c("sirna: siCtrl", "replicates: 2") SRP059643 SRS1171728 SRX1441822 SRR2939553 4378693 4378693 1 FALSE FALSE 4256583 314441916 NA NA 2015-11-20T15:45:14.000 2016-01-05T01:47:02.367 2016-01-05T01:52:21.767 74 GSM1948556 SRR2939553.bw rep2_siCDC73 c("sirna: siCDC73", "replicates: 2") SRP059643 SRS1171729 SRX1441821 SRR2939552 5804920 5804920 1 FALSE FALSE 5703914 421324357 NA NA 2015-11-20T15:45:14.000 2016-01-05T01:47:01.240 2016-01-05T01:52:21.580 74 GSM1948555 SRR2939552.bw rep1_siMYC c("sirna: siMYC", "replicates: 1") SRP059643 SRS1171730 SRX1441820 SRR2939551 8023015 8023015 1 FALSE FALSE 7869964 580807721 NA NA 2015-11-20T15:45:13.000 2016-01-05T01:47:00.430 2016-01-05T01:52:21.430 74 GSM1948554 SRR2939551.bw rep1_siCtrl_for_MYC c("sirna: siCtrl", "replicates: 1") SRP059643 SRS1171731 SRX1441819 SRR2939550 5760172 5760172 1 FALSE FALSE 5655531 417594241 NA NA 2015-11-20T15:45:12.000 2016-01-05T01:46:59.603 2016-01-05T01:52:21.270 74 GSM1948553 SRR2939550.bw rep1_siCtrl_for_CDC73 c("sirna: siCtrl", "replicates: 1") SRP059643 SRS1171732 SRX1441818 SRR2939549 5834228 5834228 1 FALSE FALSE 5731809 423175748 NA NA 2015-11-20T15:45:11.000 2016-01-05T01:46:58.360 2016-01-05T01:52:21.110 74 GSM1948552 SRR2939549.bw rep1_siCDC73 c("sirna: siCDC73", "replicates: 1") SRP059643 SRS1171733 SRX1441817 SRR2939548 8211855 8211855 1 FALSE FALSE 8003449 591480735 NA NA 2015-11-20T15:45:10.000 2016-01-05T01:46:57.423 2016-01-05T01:52:20.880 74 GSM1948551 SRR2939548.bw WT_EtOH_2 c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS1171734 SRX1441816 SRR2939547 8480906 8480906 1 FALSE FALSE 8230458 608696769 NA NA 2015-11-20T15:45:09.000 2016-01-05T01:46:56.540 2016-01-05T01:52:20.697 74 GSM1948550 SRR2939547.bw WT_Dox_2 c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS1171735 SRX1441815 SRR2939546 7912345 7912345 1 FALSE FALSE 7798933 576604496 NA NA 2015-11-20T15:45:08.000 2016-01-05T01:46:55.523 2016-01-05T01:52:20.470 74 GSM1948549 SRR2939546.bw Kless_EtOH_2 c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS1171736 SRX1441814 SRR2939545 7668419 7668419 1 FALSE FALSE 7520237 555796161 NA NA 2015-11-20T15:46:15.000 2016-01-05T01:46:54.283 2016-01-05T01:52:20.263 74 GSM1948548 SRR2939545.bw Kless_Dox_2 c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS1171737 SRX1441813 SRR2939544 7238222 7238222 1 FALSE FALSE 7115226 526287680 NA NA 2015-11-20T15:46:14.000 2016-01-05T01:46:53.113 2016-01-05T01:52:20.077 74 GSM1948547 SRR2939544.bw K52o_EtOH_2 c("infected construct: pInducer21-MYC-K52o-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS1171738 SRX1441812 SRR2939543 7362551 7362551 1 FALSE FALSE 7192078 531512295 NA NA 2015-11-20T15:46:13.000 2016-01-05T01:46:52.237 2016-01-05T01:52:19.900 74 GSM1948546 SRR2939543.bw K52o_Dox_2 c("infected construct: pInducer21-MYC-K52o-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS1171739 SRX1441811 SRR2939542 35208919 35208919 1 FALSE FALSE 34823964 2575618362 NA NA 2015-11-20T15:46:12.000 2016-01-05T01:46:51.220 2016-01-05T01:52:19.723 74 GSM1948545 SRR2939542.bw 4SU_rep2_WT_EtOH c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 2") SRP059643 SRS1171740 SRX1441810 SRR2939541 35208919 35208919 1 FALSE FALSE 34853102 2575370565 NA NA 2015-11-20T15:46:12.000 2016-01-05T01:46:50.257 2016-01-05T01:52:19.533 74 GSM1948544 SRR2939541.bw 4SU_rep2_WT_Dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "replicates: 2") SRP059643 SRS1171741 SRX1441809 SRR2939540 35208919 35208919 1 FALSE FALSE 34866073 2577358360 NA NA 2015-11-20T15:46:11.000 2016-01-05T01:46:49.447 2016-01-05T01:52:19.373 74 GSM1948543 SRR2939540.bw 4SU_rep2_Kless_EtOH c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "replicates: 2") SRP059643 SRS1171742 SRX1441808 SRR2939539 35208919 35208919 1 FALSE FALSE 34896199 2578352404 NA NA 2015-11-20T15:46:10.000 2016-01-05T01:46:48.640 2016-01-05T01:52:19.090 74 GSM1948542 SRR2939539.bw 4SU_rep2_Kless_Dox c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "replicates: 2") SRP059643 SRS1171743 SRX1441807 SRR2939538 24632546 24632546 1 FALSE FALSE 24119363 1784677580 NA NA 2015-11-20T15:46:09.000 2016-01-05T01:46:47.747 2016-01-05T01:52:18.820 74 GSM1948541 SRR2939538.bw 4SU_rep1_WT_EtOH c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS1171744 SRX1441806 SRR2939537 24632546 24632546 1 FALSE FALSE 23894848 1767339119 NA NA 2015-11-20T15:46:08.000 2016-01-05T01:43:31.227 2016-01-05T01:48:18.817 74 GSM1948540 SRR2939537.bw 4SU_rep1_WT_Dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS1171745 SRX1441805 SRR2939536 24632546 24632546 1 FALSE FALSE 24352995 1799952453 NA NA 2015-11-20T15:46:08.000 2016-01-05T01:43:30.250 2016-01-05T01:48:18.560 74 GSM1948539 SRR2939536.bw 4SU_rep1_Kless_EtOH c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS1171746 SRX1441804 SRR2939535 24632546 24632546 1 FALSE FALSE 24416076 1806576229 NA NA 2015-11-20T15:45:17.000 2016-01-05T01:43:28.317 2016-01-05T01:48:18.250 74 GSM1948538 SRR2939535.bw 4SU_rep1_Kless_Dox c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS965167 SRX1065285 SRR2069992 4973192 4973192 1 FALSE FALSE 4837653 158789375 NA NA 2015-06-18T16:26:40.000 2016-01-05T01:11:47.970 2016-01-05T01:16:20.437 33 GSM1715534 SRR2069992.bw minus_mg_swap_dox.fastq c("infected construct: pInducer21-MYC-Swap-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965168 SRX1065289 SRR2069996 4646129 4646129 1 FALSE FALSE 4555260 149521928 NA NA 2015-06-18T16:26:46.000 2016-01-05T01:11:52.880 2016-01-05T01:16:20.180 33 GSM1715538 SRR2069996.bw plus_mg_kless_dox.fastq c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: EtOH", "replicates: 1") SRP059643 SRS965169 SRX1065288 SRR2069995 4595699 4595699 1 FALSE FALSE 4505631 147936736 NA NA 2015-06-18T16:26:45.000 2016-01-05T01:11:51.773 2016-01-05T01:16:20.000 33 GSM1715537 SRR2069995.bw minus_mg_wt_etoh.fastq c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965170 SRX1065286 SRR2069993 3952046 3952046 1 FALSE FALSE 3877470 127315711 NA NA 2015-06-18T16:26:42.000 2016-01-05T01:11:49.100 2016-01-05T01:16:19.830 33 GSM1715535 SRR2069993.bw minus_mg_swap_etoh.fastq c("infected construct: pInducer21-MYC-Swap-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965171 SRX1065287 SRR2069994 4836438 4836438 1 FALSE FALSE 4714794 154777020 NA NA 2015-06-18T16:26:43.000 2016-01-05T01:11:50.350 2016-01-05T01:16:19.580 33 GSM1715536 SRR2069994.bw minus_mg_wt_dox.fastq c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965172 SRX1065284 SRR2069991 5095095 5095095 1 FALSE FALSE 5005634 164305321 NA NA 2015-06-18T16:26:39.000 2016-01-05T01:11:46.893 2016-01-05T01:16:19.370 33 GSM1715533 SRR2069991.bw minus_mg_kless_etoh.fastq c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965173 SRX1065282 SRR2069989 3983981 3983981 1 FALSE FALSE 3890655 127675072 NA NA 2015-06-18T16:26:36.000 2016-01-05T01:11:44.770 2016-01-05T01:16:19.147 33 GSM1715531 SRR2069989.bw siskp2_wt_etoh c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "sirna: siSKP2", "replicates: 1") SRP059643 SRS965174 SRX1065283 SRR2069990 4345488 4345488 1 FALSE FALSE 4247091 139444482 NA NA 2015-06-18T16:26:37.000 2016-01-05T01:11:45.610 2016-01-05T01:16:18.957 33 GSM1715532 SRR2069990.bw minus_mg_kless_dox.fastq c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: MG", "replicates: 1") SRP059643 SRS965175 SRX1065281 SRR2069988 4888613 4888613 1 FALSE FALSE 4773814 156764408 NA NA 2015-06-18T16:26:32.000 2016-01-05T01:11:43.917 2016-01-05T01:16:18.740 33 GSM1715530 SRR2069988.bw siskp2_wt_dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "sirna: siSKP2", "replicates: 1") SRP059643 SRS965176 SRX1065280 SRR2069987 4567162 4567162 1 FALSE FALSE 4466670 146498304 NA NA 2015-06-18T16:26:31.000 2016-01-05T01:11:43.093 2016-01-05T01:16:18.523 33 GSM1715529 SRR2069987.bw sictrl_wt_etoh c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "sirna: siCtrl", "replicates: 1") SRP059643 SRS965177 SRX1065279 SRR2069986 5139192 5139192 1 FALSE FALSE 4985712 163614339 NA NA 2015-06-18T16:26:27.000 2016-01-05T01:11:42.077 2016-01-05T01:16:18.247 33 GSM1715528 SRR2069986.bw sictrl_wt_dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "sirna: siCtrl", "replicates: 1") SRP059643 SRS965178 SRX1065278 SRR2069985 6252998 6252998 1 FALSE FALSE 6093278 199996850 NA NA 2015-06-18T16:26:26.000 2016-01-05T01:11:40.707 2016-01-05T01:16:18.017 33 GSM1715527 SRR2069985.bw rep2_wt_etoh c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "replicates: 2") SRP059643 SRS965179 SRX1065277 SRR2069984 5259956 5259956 1 FALSE FALSE 5071557 166376280 NA NA 2015-06-18T16:26:24.000 2016-01-05T01:14:11.097 2016-01-05T01:20:18.060 33 GSM1715526 SRR2069984.bw rep2_wt_dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 2") SRP059643 SRS965180 SRX1065276 SRR2069983 5384604 5384604 1 FALSE FALSE 5312246 174243517 NA NA 2015-06-18T16:26:22.000 2016-01-05T01:14:10.313 2016-01-05T01:20:17.790 33 GSM1715525 SRR2069983.bw rep2_vector_dox c("infected construct: pInducer21-empty", "etoh/dox treatment: Dox", "replicates: 2") SRP059643 SRS965181 SRX1065275 SRR2069982 5347769 5347769 1 FALSE FALSE 5214986 171033005 NA NA 2015-06-18T16:26:20.000 2016-01-05T01:14:09.373 2016-01-05T01:20:17.613 33 GSM1715524 SRR2069982.bw rep2_kless_etoh c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "replicates: 2") SRP059643 SRS965182 SRX1065274 SRR2069981 5850289 5850289 1 FALSE FALSE 5638071 185054734 NA NA 2015-06-18T16:25:21.000 2016-01-05T01:14:08.373 2016-01-05T01:20:17.447 33 GSM1715523 SRR2069981.bw rep2_kless_dox c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "replicates: 2") SRP059643 SRS965183 SRX1065273 SRR2069980 5016965 5016965 1 FALSE FALSE 4842869 158949860 NA NA 2015-06-18T16:25:20.000 2016-01-05T01:14:07.547 2016-01-05T01:20:17.267 33 GSM1715522 SRR2069980.bw rep1_wt_etoh c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS965184 SRX1065272 SRR2069979 5853164 5853164 1 FALSE FALSE 5574658 182754391 NA NA 2015-06-18T16:25:19.000 2016-01-05T01:14:06.803 2016-01-05T01:16:17.800 33 GSM1715521 SRR2069979.bw rep1_wt_dox c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS965185 SRX1065271 SRR2069978 5572737 5572737 1 FALSE FALSE 5473234 179716434 NA NA 2015-06-18T16:25:17.000 2016-01-05T01:14:05.593 2016-01-05T01:16:17.610 33 GSM1715520 SRR2069978.bw rep1_vector_dox c("infected construct: pInducer21-empty", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS965186 SRX1065270 SRR2069977 5064631 5064631 1 FALSE FALSE 4906502 160973868 NA NA 2015-06-18T16:25:16.000 2016-01-05T01:21:59.227 2016-01-05T01:24:15.767 33 GSM1715519 SRR2069977.bw rep1_kless_etoh c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "replicates: 1") SRP059643 SRS965187 SRX1065269 SRR2069976 6071390 6071390 1 FALSE FALSE 5797510 190186608 NA NA 2015-06-18T16:25:14.000 2016-01-05T01:22:24.863 2016-01-05T01:28:14.660 33 GSM1715518 SRR2069976.bw rep1_kless_dox c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: Dox", "replicates: 1") SRP059643 SRS965792 SRX1065294 SRR2070001 4286652 4286652 1 FALSE FALSE 4215483 138421243 NA NA 2015-06-18T16:26:54.000 2016-01-05T01:11:58.230 2016-01-05T01:15:16.160 33 GSM1715543 SRR2070001.bw plus_mg_wt_etoh.fastq c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: EtOH", "replicates: 1") SRP059643 SRS965793 SRX1065291 SRR2069998 4440648 4440648 1 FALSE FALSE 4352906 142942473 NA NA 2015-06-18T16:26:50.000 2016-01-05T01:11:55.110 2016-01-05T01:15:15.943 33 GSM1715540 SRR2069998.bw plus_mg_swap_dox.fastq c("infected construct: pInducer21-MYC-Swap-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: EtOH", "replicates: 1") SRP059643 SRS965794 SRX1065292 SRR2069999 4095350 4095350 1 FALSE FALSE 4026443 132207057 NA NA 2015-06-18T16:26:51.000 2016-01-05T01:11:56.030 2016-01-05T01:15:15.717 33 GSM1715541 SRR2069999.bw plus_mg_swap_etoh.fastq c("infected construct: pInducer21-MYC-Swap-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: EtOH", "replicates: 1") SRP059643 SRS965795 SRX1065293 SRR2070000 4535212 4535212 1 FALSE FALSE 4442737 145862540 NA NA 2015-06-18T16:26:52.000 2016-01-05T01:11:57.223 2016-01-05T01:15:15.550 33 GSM1715542 SRR2070000.bw plus_mg_wt_dox.fastq c("infected construct: pInducer21-MYC-WT-HA", "etoh/dox treatment: Dox", "mg/etoh treatment: EtOH", "replicates: 1") SRP059643 SRS965796 SRX1065290 SRR2069997 4685482 4685482 1 FALSE FALSE 4614019 151476963 NA NA 2015-06-18T16:26:48.000 2016-01-05T01:11:54.140 2016-01-05T01:15:15.280 33 GSM1715539 SRR2069997.bw plus_mg_kless_etoh.fastq c("infected construct: pInducer21-MYC-Kless-HA", "etoh/dox treatment: EtOH", "mg/etoh treatment: EtOH", "replicates: 1")